whweve/wisassoplot2: visualize genome-wide association study with gene annotation and linkage disequiblism

WisAssoPlot, an R package, provides improved visual display of GWAS results in a publication-ready format. The main panel of a WisAssoPlot plot contains connecting line link the relative association p-values on the -log10 scale, the genome annotation, and the linkage disequiblism (LD) matrix. Inspection of the output image can provide important biological information including locis that passed the genome-wide significant threshold, genes harbored or located near the significant loci, and the extent of LD within the selected region.

install.packages("remotes")
remotes::install_github("whweve/wisassoplot2")