pp_sig: Pre-processing signature genes file

Description Usage Arguments Value

Description

Subsets signature genes based on the genes that are common to the users dataset and signature genes

Usage

1
pp_sig(exp, sig)

Arguments

exp

Dataframe of transcriptomic data (natural scale) containing genes as rows and samples as columns. Note: Gene names should be set as row names and duplicates are not allowed. Missing values are not allowed within the expression matrix. Check example- head(example_data): example_data.

Value

Signature genes dataframe


willemdek11/CellSignature documentation built on Jan. 17, 2020, 2:14 p.m.