willtownes/quminorm: Quantile Normalization of Single-cell RNA-seq Read Counts Without UMIs

Converts single-cell RNA-seq read counts lacking unique molecular identifiers (UMIs) into "quasi-UMIs" which can be analyzed as if they were real UMI counts. The goal of this normalization is to remove distortions due to PCR amplification.

Getting started

Package details

LicenseLGPL (>= 3) | file LICENSE
URL https://github.com/willtownes/quminorm
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
willtownes/quminorm documentation built on March 13, 2021, 2:16 a.m.