plan_to_notebook: Turn a 'drake' plan into an R notebook. *[Questioning]*

In wlandau-lilly/drake: A Pipeline Toolkit for Reproducible Computation at Scale

Turn a drake plan into an R notebook.

Description

code_to_plan(), plan_to_code(), and plan_to_notebook() together illustrate the relationships between drake plans, R scripts, and R Markdown documents. In the file generated by plan_to_code(), every target/command pair becomes a chunk of code. Targets are arranged in topological order so dependencies are available before their downstream targets. Please note:

1. You are still responsible for loading your project's packages, imported functions, etc.

2. Triggers disappear.

Usage

plan_to_notebook(plan, con)

Arguments

plan	Workflow plan data frame. See drake_plan() for details.
con	A file path or connection to write to.

See Also

drake_plan(), make(), code_to_plan(), plan_to_code()

Examples

if (suppressWarnings(require("knitr"))) {
plan <- drake_plan(
  raw_data = read_excel(file_in("raw_data.xlsx")),
  data = raw_data,
  hist = create_plot(data),
  fit = lm(Ozone ~ Temp + Wind, data)
)
file <- tempfile()
# Turn the plan into an R notebook a the given file path.
plan_to_notebook(plan, file)
# Here is what the script looks like.
cat(readLines(file), sep = "\n")
# Convert back to a drake plan.
code_to_plan(file)
}

wlandau-lilly/drake documentation built on Dec. 3, 2024, 11:09 p.m.