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  1. 5 pts. Try remaking the distributions from class, but with a lognormal function (use rgamma). In particular, have a look at the scale parameter and the rate parameter. What do these two parameters do? What does a high scale but low rate imply? A low scale bu high rate? Include your code below so I can reproduce the figures.
# Code here
# Descriptive answer here
  1. 2 points. Have a look at this paper. In the section "Assumptions about the evolutionary process," I make a few arguments about how Bayesian and parsimony methods are the same, and how they are different. Do you buy what I'm selling in this section? Why or why not?
# Answer here
  1. 2 points. Something that a lot of researchers struggle with is how to set priors. Based on what you've read so far, how big a problem do you think that is, and do you think researchers can do anything to mitigate damaging effects of not having a strong intuition for the prior?
# Answer here
  1. 1 pts. Continuous trait data aren't well used in phylogenetics right now. Do you think that should change?
# Answer here


wrightaprilm/Systematics2020 documentation built on April 30, 2022, 11:59 a.m.