Man pages for wuergh/hedgehog
R functions for personal use
| call.tcga.cnas | Call copy numbers from TCGA level 3 data |
| censoring.km.estimate | Get Kaplan-Meier estimate of censoring distribution at time... |
| colour.code.cnas | Colour code CNAs |
| confidence.interval | confidence.interval |
| conf.int.string | Make confidence interval string. |
| convert.time.numeric | convert.time.numeric |
| cosine.similarity | Calculate cosine similarity between two vectors |
| datestamp.filename | Generate date-stamped filename |
| factor.to.numeric | Convert a factor to the numeric values in factor levels |
| fg.model.ipcw | IPCW for Fine-Gray model |
| format.p.value | format.p.value |
| geometric.mean | geometric.mean |
| get.colour.palette | get.colour.palette |
| get.wrapped.term | Extract wrapped term from formula |
| head.cat | Print head of an arbitrary number of objects. |
| integer.coded | Integer code a vector |
| interleave | Interleave two vectors. Any overhang due to mismatching... |
| is.error | is.error |
| km.plot | Plot Kaplan-Meier curves. |
| lhs | Latin hypercube sampling |
| parse.tcga.id | parse.tcga.id |
| read.header | read.header |
| revd | Generate obervations from extreme value distribution |
| rnorm.bivariate | rnorm.bivariate |
| scientific.notation | scientific.notation |
| show.colour.palette | show.colour.palette |
| source.directory | Source directory |
| str.cat | Display structure of an arbitrary number of objects. |
| stripboxplot | stripboxplot |
| truncate.survival | Truncate survival |
| varied.rep | rep function extended to support variable number of repeats... |
| vital.status.known | Known vital status indicator |
