View source: R/deprec-phenotype_connect.R
phenotype_connect | R Documentation |
This method is depricated and will be removed in future versions
phenotype_connect(api_key = NULL, project = NULL, root_url = NULL)
api_key |
the api key from the /api-key-service endpoint of your CSA host through a browser |
project |
project name |
root_url |
root_url of the Query API to use, e.g. "http://localhost:1337". If left as NULL the function will try to get it from the environment variable GOR_API_ROOT_URL, otherwise it will take it from the iss part of the decoded JWT (api_key) |
returns a list with the connection data
## Not run: api_key <- "...paste from your /api-key-service/token endpoint..." conn <- phenotype_connect(api_key, "test_project") # or have phenotype_connect take the api_key from the environment variable GOR_API_KEY: conn <- phenotype_connect(project = "test_project") ## End(Not run)
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