Man pages for wwylab/DeMixT
Cell type-specific deconvolution of heterogeneous tumor samples with two or three components using expression data from RNAseq or microarray platforms
| DeMixT | Deconvolution of heterogeneous tumor samples with two or... |
| DeMixT_DE | Estimates the proportions of mixed samples for each mixing... |
| DeMixT_GS | Estimates the proportions of mixed samples for each mixing... |
| DeMixT_preprocessing | DeMixT_preprocessing |
| DeMixT_S2 | Deconvolves expressions of each individual sample for unknown... |
| Optimum_KernelC | Kernel function for optimizing parameters and hidden... |
| simulate_2comp | Function to simulate two-component test data |
| simulate_3comp | Function to simulate three-component mixed cell line test... |
| test.data.2comp | Simulated two-component test data |
| test.data.3comp | Simulated three-component mixed cell line test data |
