standardize3D: Standardize 3D images

Description Usage Arguments Value Examples

View source: R/step2_standardize3D.R

Description

Standardize topographies so that they have the same lateral resolution (6.25 microns), and crop/pad images such that they are 701x701 pixel images (NOTE: first find plane and level, and then only standardize before further pre-processing)

Usage

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standardize3D(surfaceMat, lateralResMicrons)

Arguments

surfaceMat

matrix of depth values in microns

lateralResMicrons

lateral resolution of image

Value

Standardized image for further pre-processing.

Examples

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## Not run: 
    testImage <- standardize3D(testImage, lateralResMicrons)

## End(Not run)

xhtai/cartridges3D documentation built on March 1, 2020, 8:57 p.m.