query_anno: Query annotation information of gene data from 'query_gene'...

In xiayh17/TFmapperTool:

Description

Query annotation information of gene data from 'query_gene' or 'query_coord'

Usage

query_anno(
  tfmapperdb = tfmapperdb,
  gene_data,
  cell_line_key = cell_line_key,
  cell_type_key = cell_type_key,
  tissue_type_key = tissue_type_key
)

Arguments

tfmapperdb	default 'tfmapperdb', SQLiteConnection name
gene_data	result from query_gene or query_coord
cell_line_key	default 'cell_line_key', keywords of Cell line
cell_type_key	default 'cell_type_key', keywords of Cell type
tissue_type_key	default 'tissue_type_key', keywords of tissue type

Value

a data.frame contains annotation results

Examples

## Not run: 
query_anno(gene_pos)

## End(Not run)

xiayh17/TFmapperTool documentation built on Jan. 16, 2022, 1:18 p.m.