Man pages for xieguigang/biscuit
R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.
| color_palette | getting distinguishable colours for clusters |
| Confusion_matrix_stitch_parallel_MAP | Construct the global Confusion matrix. |
| dot-require_packages | load packages that required |
| extras | Recomputing cluster probabilities of each cell to its cluster |
| extras_onegenebatch | extras one gene batch |
| fiedler.vector | Projecting X |
| IMM_Gibbs_MCMC_parallel | Main MCMC Engine ####################### |
| loadSingleCellMatrix | Load matrix for single cell data |
| mds.tau | MDS scaling |
| post_MCMC_genesplit_merge | Combine the runs/gene_batches |
| post_process | Compute imputed data based on inferred variables |
| process_data | Loading Data |
| project.data | Projecting X |
| singlecell_processor | call BISCUIT |
| sub_batch | Fix the number of parallel subprocesses |
