Files in xihaoli/STAARpipelineSummary
Summarization and Visualization of Analysis Results Generated by STAARpipeline

.Rbuildignore

.github/workflows/R-CMD-check.yaml

.gitignore

.travis.yml

DESCRIPTION

NAMESPACE

R/Annotate_Single_Variants.R R/Dynamic_Window_Results_Summary.R R/Gene_Centric_Coding_Info.R R/Gene_Centric_Coding_Results_Summary.R R/Gene_Centric_Coding_Results_Summary_incl_ptv.R R/Gene_Centric_Noncoding_Info.R R/Gene_Centric_Noncoding_Results_Summary.R R/Individual_Analysis_Results_Summary.R R/Single_Variants_List_Analysis.R R/Sliding_Window_Info.R R/Sliding_Window_Results_Summary.R R/fit_nullmodel_genome_cond_spa.R R/info_UTR.R R/info_disruptive_missense.R R/info_downstream.R R/info_enhancer_CAGE.R R/info_enhancer_DHS.R R/info_missense.R R/info_ncRNA.R R/info_plof.R R/info_plof_ds.R R/info_promoter_CAGE.R R/info_promoter_DHS.R R/info_ptv.R R/info_ptv_ds.R R/info_synonymous.R R/info_upstream.R R/manhattan_plot.R

R/sysdata.rda

STAARpipelineSummary.Rproj

appveyor.yml

docs/STAARpipelineSummary_manual.pdf man/Annotate_Single_Variants.Rd man/Dynamic_Window_Results_Summary.Rd man/Gene_Centric_Coding_Info.Rd man/Gene_Centric_Coding_Results_Summary.Rd man/Gene_Centric_Coding_Results_Summary_incl_ptv.Rd man/Gene_Centric_Noncoding_Info.Rd man/Gene_Centric_Noncoding_Results_Summary.Rd man/Individual_Analysis_Results_Summary.Rd man/Single_Variants_List_Analysis.Rd man/Sliding_Window_Info.Rd man/Sliding_Window_Results_Summary.Rd man/fit_nullmodel_genome_cond_spa.Rd

xihaoli/STAARpipelineSummary documentation built on Oct. 20, 2024, 9:35 p.m.

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