metaPlot: metaPlot

In xons/chipMap: Make heatmap of High throughput sequencing data

Description

This function plots the mean of each column to give a summary profile of the matrix, which is usually a hat shape.

Usage

metaPlot(mxls, titles, out.pdf = F, color = NA, center = "peak",
  label_win = "5 kb", ylim = NA)

Arguments

mxls	A list of matrix generated by tssMap or peakMap,must be the same dimensions.
titles	Figure title and output file name
out.pdf	Save image as PDF or PNG. Default is PNG.
color	line colors
center	center type of the matrix, 'peak' or 'tss'. Default is 'peak'.
label_win	label of the window size. Default is '5 kb'.
ylim	y limit of the plot. Default is 0 to the maximum value of the matrix.

Value

plot

xons/chipMap documentation built on May 4, 2019, 1:25 p.m.