Man pages for xuzhougeng/binmapr
Call Marker from SNP Data using Binmap
| calcFreqFromAd | Calculate the frequcy of Allele depth |
| calcMissRatio | Calculate the missing ratio of each sample on all site |
| callGtFromAd | call genotype from Allele depth by Frequency |
| callWindowGeno | Call genotype by fix-size window |
| export2cross | Generate cross object for R/qtl |
| fixGenoError | Fix potential genotype error |
| geno | Rice QTL genotype data |
| getAdFromVcf | get the Allele depth from vcf |
| pheno | Rice QTL phenotype data |
| plotGenoHeatmap | genotype heatmap |
| plotMarker | marker distribution in scaffold/contigs |
| plotRfHeatmap | Recombination fractions heatmap |
| read.fastphase | read fastPHASE format |
| sub-.binmapr | Subset method for binmapr objects |
| subset.binmapr | subset the binmaprt data |
| write.fastphase | write fastPHASE format |
