create_simulated_data: Simulate the epidemic with in a household

In yairgoldy/sl4hm: Simulated likelihood for modelling household epidemics

Description

Simulate the epidemic with in a household

Usage

create_simulated_data(
  seed = -1,
  family_structure_data,
  beta_cc,
  beta_ca,
  beta_ac,
  beta_aa,
  P = NULL,
  T_max = 45,
  ssn = 1
)

Arguments

seed	seed for the simulation
family_structure_data	dataset of families including the number of adults, number of children, and the index case (see create_family_structure_data)
beta_cc	proabilty that a child will infect a child
beta_ca	proabilty that an adult will infect a child
beta_ac	proabilty that a child will infect an adult
beta_aa	proabilty that an adult will infect an adult
P	a vector of generation time distribution (default is generated by load_P)
T_max	the length of the epidemic within the family
ssn	the number of households to simulate

Value

a tibble with the epidemic development over time by day

See Also

create_family_structure_data load_P

yairgoldy/sl4hm documentation built on Feb. 3, 2021, 5:45 p.m.