Description Usage Format Source References Examples
Example data needed to run function BEFDR function
1 | data("Chicken")
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A .RData object contains several vecotrs and data.frames
sigMrk
a vector of SNPs that captures the polygenic backgroud, so I would like to keep them as fixed effect, which means they will be kept in the minimal model
mrksT
a set of markers I want to do BE on
mrk_geno
is a genotype matrix
phe
a vector contains phenotype
phe
fx1 is a vector contains sex
mrk_info
a matrix contains the name and location of all the marker
A complex multi-locus, multi-allelic genetic architecture underlying the long-term selection-response in the Virginia body weight line of chickens (In prepartion)
Sheng Z, Pettersson ME, Honaker CF, Siegel PB, Carlborg <c3><96>. 2015. Standing genetic variation as a major contributor to adaptation in the Virginia chicken lines selection experiment. Genome Biol 16: 219.
A complex multi-locus, multi-allelic genetic architecture underlying the long-term selection-response in the Virginia body weight line of chickens (In prepartion)
1 | data(Chicken.RData)
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