Files in yavorska/TenXAnalysisPackage
Analysis of the 10x Genomics 1.3 Million Cells Data
.Rbuildignore
.Rhistory
.gitignore
DESCRIPTION
NAMESPACE
R/AllClasses.R
R/AllData.R
R/AllExtraPlotColorFunctions.R
R/AllExtraPlottingFunctions.R
R/AllGenerics.R
R/AllGenericsAccessors.R
R/AllGenericsIndexing.R
R/AllGenericsPlotting.R
R/AllWarningMessages.R
R/GenerateExample.R
R/methods_accessor.R
R/methods_generateSubset.R
R/methods_generateSummaryExpr.R
R/methods_indexing.R
R/methods_plotTenX.R
R/methods_plotTenXCVs.R
R/methods_plotTenXGO.R
R/methods_plotTenXGene.R
R/methods_plotTenXGeneCor.R
R/methods_plotTenXGeneGO.R
R/methods_plotTenXGenePair.R
R/methods_plotTenXGroupExpr.R
R/methods_plotTenXMeans.R
R/methods_plotTenXMouseExpr.R
R/methods_plotTenXVars.R
R/methods_show.R
README.md
TENxAnalysisPackage.Rproj
data/EG2GO.RData
data/TenXse_Margins.RData
data/Test_TenXSubset.RData
man/EG2GO.Rd
man/TenXSubset-class.Rd
man/TenXSubsetAll.Rd
man/TenXse_colData.Rd
man/TenXse_rowData.Rd
man/cellCounts.Rd
man/cellCountsExpr.Rd
man/cellCountsTrans.Rd
man/cellGroup.Rd
man/cellIndex.Rd
man/cellLib.Rd
man/cellMouse.Rd
man/cellN.Rd
man/determineGOFromGene.Rd
man/determineGeneFromGO.Rd
man/determineGeneFromQuery.Rd
man/determineGeneID.Rd
man/determineGroupAnnotations.Rd
man/determineLibraryAnnotations.Rd
man/determineLibraryFromGroup.Rd
man/determineMouseFromGroup.Rd
man/determineSampleFromGroup.Rd
man/geneCounts.Rd
man/geneENSEMBL.Rd
man/geneExpressed.Rd
man/geneIndex.Rd
man/geneN.Rd
man/geneNames.Rd
man/generateSubset.Rd
man/generateSummaryExpr.Rd
man/groupN.Rd
man/groupSize.Rd
man/libN.Rd
man/plotTenX.Rd
man/plotTenXGO.Rd
man/plotTenXGene.Rd
man/plotTenXGeneCor.Rd
man/plotTenXGeneGO.Rd
man/plotTenXGenePair.Rd
man/plotTenXGroupExpr.Rd
man/plotTenXMouseExpr.Rd
tests/testthat.R
vignettes/DatasetExplained.pdf.pdf
vignettes/TENxAnalysisVignette.Rmd
vignettes/desktop.ini
