README.md

In ycl6/BSgenome.Bdistachyon.JGI.Bd3.1: Full genome sequences for Brachypodium distachyon (JGI version 3.0 assembly)

BSgenome.Bdistachyon.JGI.Bd3.1

This Biostrings-based genome data package contains the full genome sequences for Brachypodium distachyon Bd21 (Purple false brome) downloaded from Phytozome v11 (https://phytozome.jgi.doe.gov/) and also the chloroplast genome obtained from the NCBI Nucleotide database (EU325680)

Citing Phytozome

• Goodstein DM, Shu S, Howson R, Neupane R, Hayes RD, Fazo J, Mitros T, Dirks W, Hellsten U, Putnam N, Rokhsar DS. (1021) Phytozome: a comparative platform for green plant genomics. Nucleic Acids Res. D1178-86
• Brachypodium distachyon v3.1 DOE-JGI, http://phytozome.jgi.doe.gov/

Citing chloroplast genome

• BMC Res Notes. 2008 Jul 31;1:61. doi: 10.1186/1756-0500-1-61. Bortiri E1, Coleman-Derr D, Lazo GR, Anderson OD, Gu YQ. (2008) The complete chloroplast genome sequence of Brachypodium distachyon: sequence comparison and phylogenetic analysis of eight grass plastomes. BMC Res Notes. 1:61

ycl6/BSgenome.Bdistachyon.JGI.Bd3.1 documentation built on May 4, 2019, 2:32 p.m.