package: Annotation package for TxDb object(s)

In ycl6/TxDb.Bdistachyon.JGI.Bd3.1.geneexons: Annotation package for TxDb object(s) for Brachypodium distachyon (JGI version 3.1)

Description

This package loads one or more TxDb objects. Such TxDb objects are an R interface to prefabricated databases contained by this package.

The names of any objects exposed by this package indicate the origin and resources exposed. So for example TxDb.Bdistachyon.JGI.Bd3.1.geneexons would be a TxDb object, of Brachypodium distachyon data from JGI v3.1 annotation (Bdistachyon_314_v3.1.gene_exons.gff3).

Note

This data package was made from resources at Phytozome v11 (https://phytozome.jgi.doe.gov/) on 2016-02-19 23:18:55 +0800 (Fri, 19 Feb 2016) and based on the JGI v3.0 assembly and the JGI v3.1 annotation.

Author(s)

I-Hsuan Lin

See Also

transcripts, transcriptsBy

Examples

## load the library
library(TxDb.Bdistachyon.JGI.Bd3.1.geneexons)
## list the contents that are loaded into memory
ls('package:TxDb.Bdistachyon.JGI.Bd3.1.geneexons')
## show the db object that is loaded by calling it's name
TxDb.Bdistachyon.JGI.Bd3.1.geneexons

ycl6/TxDb.Bdistachyon.JGI.Bd3.1.geneexons documentation built on May 4, 2019, 2:32 p.m.