check_and_liftCC: Check and lift cell type compositions between 2 CellChat...
In ycl6/scRUtils: Single-Cell Sequencing Analysis Utilities
check_and_liftCC R Documentation
Check and lift cell type compositions between 2 CellChat objects
Description
This function check the cell type compositions in 2 input CellChat objects,
use the liftCellChat function from CellChat to update the slot related to the
cell-cell communication network, including slots object@net, object@netP
and object@idents, so that both objects will have same cell labels.
Usage
check_and_liftCC(x1, x2)
Arguments
x1
A CellChat object containing one dataset.
x2
A CellChat object containing one dataset.
Details
NA
Value
A list containing updated CellChat objects.
Author(s)
I-Hsuan Lin
ycl6/scRUtils documentation built on Feb. 18, 2025, 6:14 a.m.
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| check_and_liftCC | R Documentation |
Check and lift cell type compositions between 2 CellChat objects
Description
This function check the cell type compositions in 2 input CellChat objects,
use the liftCellChat function from CellChat to update the slot related to the
cell-cell communication network, including slots object@net, object@netP
and object@idents, so that both objects will have same cell labels.
Usage
check_and_liftCC(x1, x2)
Arguments
x1 |
A CellChat object containing one dataset. |
x2 |
A CellChat object containing one dataset. |
Details
NA
Value
A list containing updated CellChat objects.
Author(s)
I-Hsuan Lin
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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