elimScore-class: Classes "elimScore" and "weight01Score"

In ycl6/topGO-Bioc: Enrichment Analysis for Gene Ontology

Description

Classes that extend the "classicScore" class by adding a slot representing the members that need to be removed.

Details

TODO:

Objects from the Class

Objects can be created by calls of the form new("elimScore", testStatistic, name, allMembers, groupMembers, score, alternative, elim, cutOff, ...). ~~ describe objects here ~~

Slots

elim:

Object of class "integer" ~~

cutOff:

Object of class "numeric" ~~

score:

Object of class "numeric" ~~

.alternative:

Object of class "logical" ~~

name:

Object of class "character" ~~

allMembers:

Object of class "character" ~~

members:

Object of class "character" ~~

testStatistic:

Object of class "function" ~~

testStatPar:

Object of class "list" ~~

Extends

Class "classicScore", directly. Class "groupStats", by class "classicScore", distance 2.

Methods

No methods defined with class "elimScore" in the signature.

Author(s)

Adrian Alexa

See Also

classicScore-class, groupStats-class, getSigGroups-methods

Examples

##---- Should be DIRECTLY executable !! ----

ycl6/topGO-Bioc documentation built on July 30, 2020, 1:10 a.m.