Man pages for yikeshu0611/ICGCtoolsR
To analysis ICGC database
| ICGC.diffExpression | To do different expression matrix and genes |
| ICGC.diffExpression_heatmap | To plot heatmap for diff expression genes |
| ICGC.diffExpression_kmAnalysis | To do KM analysis for ICGC diffExpression data |
| ICGC.diffExpression_Lasso | Use lasso to deal colinear in genes |
| ICGC.diffExpression.multiVarCox | To do Cox regression of genes |
| ICGC.diffExpression_nomogram | To plot nomogram for cox regression |
| ICGC.diffExpression_singleGene.kmAnalysis | To do KM analysis for a single gene in ICGC data |
| ICGC.diffExpression_singleGene.ROC | To do ROC analysis for a single gene in ICGC data |
| ICGC.diffExpression_univarCox | To do KM univariable Cox regression for ICGC diffExpression... |
| ICGC.diffExpression_Volcano | To plot Volcano for diff genes |
| ICGC.getData | To download and import ICGC data |
