ICGC.getData: To download and import ICGC data

In yikeshu0611/ICGCtoolsR: To analysis ICGC database

Description

This function can be used to download and import ICGC data. Release and Project params can be finded in ICGC web. The other params are all logical words, which False as defaulted.

Usage

ICGC.getData(Release, Project, donor = FALSE, specimen = FALSE,
  exp_array = FALSE, exp_seq = FALSE)

Arguments

Release	the release verson, EX: release_28 or current
Project	the project of data, EX: ALL-US
donor	a logical param. TRUE: to download this data. FALSE, as defaulted
specimen	a logical param. TRUE: to download this data. FALSE, as defaulted
exp_array	a logical param. TRUE: to download this data. FALSE, as defaulted
exp_seq	a logical param. TRUE: to download this data. FALSE, as defaulted

Value

a list

Author(s)

Jing Zhang

Examples

ICGC.getData(Release="current",Project="ALL-US",donor=TRUE)

yikeshu0611/ICGCtoolsR documentation built on Sept. 6, 2019, 12:14 p.m.