An S4 object for storing network fingerprint similarity score information.
raw_score,
a numeric vector, network fingerprint based on reference networks before standardization.
randomized_score,
a data frame, the permulated similarity score.
standardized_score,
a numeric vector, the final standardized network fingerprint.
cluster,
an APResult list, more details see package **apcluster**, each element provides a cluster information of a biological network based on one reference networks. #'@section method:
perm_score, signature(object = "NFP")
:
extract the randomized similarity score
cluster_info, signature(object = "NFP")
:
extract the cluster information
sub_NFP, signature(object = "NFP")
:
subset of NFP object
plot, signature(object, type = "character", p_size = "numeric", l_size = 'numeric')
:
plot NFP results
show, signature(object = "NFP")
:
display methods for S4 classes NFP, see also
show
show-methods
,
plot-methods
, perm_score-methods
,
cluster_info-methods
, sub_NFP-methods
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