multiBed3sp: Multiply genotypeMatrix by a matrix (sparse)

In yingxi-kaylee/ssCTPR: Cross-Trait Penalized Regression using Summary Statistics

Description

Multiply genotypeMatrix by a matrix (sparse)

Usage

multiBed3sp(
  fileName,
  N,
  P,
  beta,
  nonzeros,
  colpos,
  ncol,
  col_skip_pos,
  col_skip,
  keepbytes,
  keepoffset,
  trace
)

Arguments

fileName	location of bam file
N	number of subjects
P	number of positions
col_skip_pos	which variants should we skip
col_skip	which variants should we skip
keepbytes	which bytes to keep
keepoffset	what is the offset
input	the matrix

Value

an armadillo genotype matrix

yingxi-kaylee/ssCTPR documentation built on Nov. 14, 2021, 5:24 a.m.