Description Usage Arguments Value Examples
This function allows you to compute the average number of assays needed per pool using mini pooling algorithm with covariates.
1 2 | mmpa(v, s, K = 5, vf_cut = 1000, lod = 0, method = "permutation",
perm_num = 100)
|
v |
Vector of viral load. |
s |
Vector of risk score with the same length of viral load. |
K |
Pool size, default is 5. |
vf_cut |
Cutoff for individual viral failure, default is 1000. |
lod |
Vector of true VL of those undetectable, default is 0. |
method |
The method used for the average test number calculation, default is "permutation". |
perm_num |
The number of permutation to be used for the calculation, default is 100. |
The average number of assays needed per pool and per subject.
1 2 3 4 5 |
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