In ymwang233/DEpath: Identification Pathways of Diseases Based on Drug Enrichment

knitr::opts_chunk$set(
  collapse = TRUE,
  comment = "#>"
)

library(DEpath)

Here as an example, we use disease2sig function calculate the disease characteristics,use disease2drug calculate disease related drugs, use drug2gene function calculate the drug list related gene and use disease2path function calculate the disease related pathway by using the disease MeSHid D002277 as input.

disease2sig("D002277")
disease2drug("D002277")
drug2gene("D002277")
disease2path("D002277")

ymwang233/DEpath documentation built on April 10, 2021, 1:36 p.m.