Description Arguments Details Value Author(s) References See Also Examples
getBC
is a function to get the bicluster of DELTA
.
getBC
will return the gene names and condiction names of the bicluster you give.
thisBC = getBC(results, ...);
results |
The result of DELTA. |
numBC |
Which bicluster you want to see. |
results = delta(data, file = "MBDC", q = 0.06, c = 0.95, f = 1, k = 2, r = 1, o = 100, d = "F");
thisBC = getBC(results, numBC = 1);
The R function, getBC
returns an object of list
:
genes | The gene names in this bicluster. |
conds | The condiction names in this bicluster. |
num_gene | The number of genes in this bicluster. |
num_cond | The number of condictions in this bicluster. |
Yu Shang (JLU & UGA) yushang@uga.edu
Qiong Yu (JLU & UGA) yuqiong@uga.edu yujoan_2001@163.com
Huansheng Cao (UGA) hshcao@uga.edu
Guoqing Liu (IMUST & UGA) gqliu@uga.edu gqliu1010@163.com
Xiufeng Liu (GZUCM & UGA) xfliu@uga.edu liu_xf@gzucm.edu.cn
Hao Wu (BIT & UGA) wuhao@uga.edu wuhao@bit.edu.cn
Yan Wang (JLU & UGA) wy6868@hotmail.com
Ying Xu (JLU & UGA) xyn@uga.edu xyn@bmb.uga.edu
Maintainer: Yu Shang (JLU & UGA) yushang@uga.edu
citation("delta");
Li, Ma, et al. (2009) QUBIC: a qualitative biclustering algorithm for analyses of gene expression data Nucleic Acids Research 07/2009 37(15):e101
https://code.google.com/p/qubic-biclustering/
DELTA-package
DELTA-method
toy
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