drdiff: Differential function this function will calculate...

Description Usage Arguments Value

View source: R/dr.diff.R

Description

Differential function this function will calculate differentail of all data based on group

Usage

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drdiff(datafiles, job_dir, outformat = "json", method = "rank-test",
  alternative = "two.sided", min_samples = 5, pvalcorrection = "fdr")

Arguments

datafiles

contain file1, data matrix used for analysis, each column is a data vector and file2, group information for each patient

method,

t-test, rank-test, (wilcox-test, kruskal, default test)

alternative,

two.sided, less, greater (default two.sided)

min_samples,

minimum samples for correlation calculation

pvalcorrection,

fdr, bonferroni

Value

results


yumengw/utilR documentation built on Dec. 29, 2017, 7:13 a.m.