label4MRI: label4MRI: label human brain MRI image by AAL/BA system

In yunshiuan/label4MRI: MRI-labeling

label4MRI: label human brain MRI image by AAL/BA system

Description

The goal is to facilitate brain coordinate labeling. This is essential for big data processing when dealing with a huge number of brian coordinates.

Key functions:

• mni_to_region_name

  • Input an MNI coordinate, output the corresponding AAL (Automated Anatomical Labeling) and BA (Brodmann area) brain region name.

  • More importantly, if the coordinate does not match a brain region defined by AAL/BA (e.g., white matter), the package help find the closest brain region along with the corresponding distance.

• region_name_to_mni

  • Input a brain region name, output the MNI coordinates within it.

• list_brain_regions

  • List the brain regions defined by each labeling system.

• show_cluster_composition

  • Show brain cluster composition (i.e., percentage of each brain region within it).

Author(s)

Main Author and Maintainer: Chuang, Yun-Shiuan (Sean) [e-mail]

Other contributors:

• Losses Don

See Also

Github : https://github.com/yunshiuan/label4MRI
Report bugs or comments at https://github.com/yunshiuan/label4MRI/issues

yunshiuan/label4MRI documentation built on Aug. 31, 2023, 3:24 p.m.