data_ms2_by_plot: Plot MS2 spectrum with b, y ions.
In yuriychen/MSPlotcyl: MS spectrum plot
data_ms2_by_plot R Documentation
Plot MS2 spectrum with b, y ions.
Description
Plot MS2 spectrum with b, y ions.
Usage
data_ms2_by_plot(mzXML, scan_num, pep_seq = "", threshold = 0.5)
Arguments
mzXML
A data set from data_read_mzXML function.
scan_num
A integer.
pep_seq
A string of peptide sequence.
threshold
A integer of mz error with defalut .5.
Details
Input a mzXML from data_read_mzXML function and scan number and peptide sequence, then return a list of ggplot objects.
Value
A list of ggplot2 object.
yuriychen/MSPlotcyl documentation built on April 5, 2022, 6:36 a.m.
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| data_ms2_by_plot | R Documentation |
Plot MS2 spectrum with b, y ions.
Description
Plot MS2 spectrum with b, y ions.
Usage
data_ms2_by_plot(mzXML, scan_num, pep_seq = "", threshold = 0.5)
Arguments
mzXML |
A data set from data_read_mzXML function. |
scan_num |
A integer. |
pep_seq |
A string of peptide sequence. |
threshold |
A integer of mz error with defalut .5. |
Details
Input a mzXML from data_read_mzXML function and scan number and peptide sequence, then return a list of ggplot objects.
Value
A list of ggplot2 object.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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