atomsfromCUI: Retrieving UMLS Atoms

In yvoawk/getUMLS: Query the UMLS metathesaurus

Retrieving UMLS Atoms

Description

This function help to retrieve atoms and information about atoms for a known CUI.

Usage

atomsfromCUI(CUI, vocabulary = NULL, language = NULL, pageSize = NULL)

Arguments

CUI	UMLS Concept Unique Identifier
vocabulary	The default is NULL and returns all vocabularies. It takes any root source abbreviation in the UMLS. See the “Abbreviation” column for a list of UMLS source vocabulary abbreviations. Currently filtering by one vocabulary is supported.
language	The default is NULL and returns all languages. It takes any 3 letter language abbreviation in the UMLS, such as “ENG”,“FRE”. Currently filtering by one language is supported and the languages supported are french (FRE) and english (ENG).
pageSize	The default is NULL and returns 25 pages. pageSize is a number.

Value

A data frame.

Examples

## Not run: atom <- atomsfromCUI(CUI = "C0018689")

yvoawk/getUMLS documentation built on Aug. 2, 2022, 5:08 p.m.