dot-euclidean_linker_cpp: Return the group number for each localization.
In zcolburn/Bioi: Biological Image Analysis
Description
Usage
Arguments
Author(s)
Examples
Description
Group PALM/iPALM localizations based on their physical separation distance
PALM/iPALM data results in a list of spatial coordinates for fluorophore
localizations. This function groups nearby localizations if they are within
the provided critical distance from each other.
Usage
1
.euclidean_linker_cpp(input, critDist, use_prog_bar = TRUE)
Arguments
input
A numeric matrix where each row is a localization and each
column is a spatial axis.
critDist
The critical distance for which localizations nearer than
this distance are deemed part of the same group.
use_prog_bar
A logical indicating whether a progress bar should be
used. This must be set to false when running in parallel.
Author(s)
Zach Colburn
Examples
1
2
# Function call
## Not run: .euclidean_linker_cpp(inputMatrix, critDist)
zcolburn/Bioi documentation built on Dec. 10, 2019, 8:08 p.m.
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Description Usage Arguments Author(s) Examples
Description
Group PALM/iPALM localizations based on their physical separation distance
PALM/iPALM data results in a list of spatial coordinates for fluorophore localizations. This function groups nearby localizations if they are within the provided critical distance from each other.
Usage
1 | .euclidean_linker_cpp(input, critDist, use_prog_bar = TRUE)
|
Arguments
input |
A numeric matrix where each row is a localization and each column is a spatial axis. |
critDist |
The critical distance for which localizations nearer than this distance are deemed part of the same group. |
use_prog_bar |
A logical indicating whether a progress bar should be used. This must be set to false when running in parallel. |
Author(s)
Zach Colburn
Examples
1 2 | # Function call
## Not run: .euclidean_linker_cpp(inputMatrix, critDist)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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