msProcess-package: Protein Mass Spectra Processing
In zeehio/msProcess: Protein Mass Spectra Processing
Description
This package provides tools for protein mass spectra processing
including data preparation, denoising, noise estimation, baseline correction,
intensity normalization, peak detection, peak alignment, peak quantification,
and various functionalities for data ingestion/conversion, mass calibration,
data quality assessment, and protein mass spectra simulation.
It also provides auxiliary tools for data representation, data visualization,
and pipeline processing history recording and retrieval.
Details
Basic class structures:
msList Spectra List
msSet Spectra Set
Top level functions:
msImport Data Import
msPrepare Data Conversion
msDenoise Spectra Denoising
msDetrend Baseline Correction
msNormalize Intensity Normalization
msPeak Peak Detection
msAlign Peak Alignment
msQuantify Peak Quantification
msQualify Quality Assessment
Run library(help="msProcess") or packageDescription("msProcess")
from S-PLUS command line to get more general information about this package.
zeehio/msProcess documentation built on May 4, 2019, 10:15 p.m.
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Description
This package provides tools for protein mass spectra processing including data preparation, denoising, noise estimation, baseline correction, intensity normalization, peak detection, peak alignment, peak quantification, and various functionalities for data ingestion/conversion, mass calibration, data quality assessment, and protein mass spectra simulation. It also provides auxiliary tools for data representation, data visualization, and pipeline processing history recording and retrieval.
Details
Basic class structures:
msList | Spectra List |
msSet | Spectra Set |
Top level functions:
msImport | Data Import |
msPrepare | Data Conversion |
msDenoise | Spectra Denoising |
msDetrend | Baseline Correction |
msNormalize | Intensity Normalization |
msPeak | Peak Detection |
msAlign | Peak Alignment |
msQuantify | Peak Quantification |
msQualify | Quality Assessment |
Run library(help="msProcess") or packageDescription("msProcess")
from S-PLUS command line to get more general information about this package.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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