getGMT: functions to convert data types
In zgyaru/testSctpa: A portable toolkit for pathway activity score calculation
Description
Usage
Arguments
Details
Description
Reading a .gmt file containing pathways or gene sets
Usage
1
getGMT(gmt_file_path, n_gene_thre = 0)
Arguments
gmt_file_path
.gmt file path
n_gene_thre
minimum number of genes in gene sets
Details
Input a .gmt file path and return a list which including gene sets
zgyaru/testSctpa documentation built on Dec. 23, 2021, 9:17 p.m.
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Description Usage Arguments Details
Description
Reading a .gmt file containing pathways or gene sets
Usage
1 | getGMT(gmt_file_path, n_gene_thre = 0)
|
Arguments
gmt_file_path |
.gmt file path |
n_gene_thre |
minimum number of genes in gene sets |
Details
Input a .gmt file path and return a list which including gene sets
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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