zhejosephliu/blossomTree: Blossom Tree Graphical Models

Provides an estimation method for blossom tree graphical models. Blossom tree graphical models combine the ideas behind trees and Gaussian graphical models to form a new nonparametric family of graphical models. The approach is to attach nonparanormal blossoms, with arbitrary graphs, to a collection of nonparametric trees. The tree edges are chosen to connect variables that most violate joint Gaussianity. The non-tree edges are partitioned into disjoint groups, and assigned to tree nodes using a nonparametric partial correlation statistic. A nonparanormal blossom is then grown for each group using established methods based on the graphical lasso. The result is a factorization with respect to the union of the tree branches and blossoms, defining a high-dimensional joint density that can be efficiently estimated and evaluated on test points.

Getting started

Package details

AuthorZhe Liu <[email protected]>
MaintainerZhe Liu <[email protected]>
LicenseGPL-3
Version0.1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("zhejosephliu/blossomTree")
zhejosephliu/blossomTree documentation built on May 28, 2017, 12:47 p.m.