hapmap_geno: SNP genotypes of HapMap samples

In zhengxwen/SNPRelate: Parallel Computing Toolset for Relatedness and Principal Component Analysis of SNP Data

SNP genotypes of HapMap samples

Description

A list object including the following components:

sample.id – a vector of sample ids;

snp.id – a vector of SNP ids;

snp.position – a vector of SNP positions;

snp.chromosome – a vector of chromosome indices;

snp.allele – a character vector of “reference / non-reference”;

genotype – a “# of SNPs” X “# of samples” genotype matrix.

Usage

hapmap_geno

Value

A list

zhengxwen/SNPRelate documentation built on April 16, 2024, 8:42 a.m.