plot.bfcluster: Plot bfcluster object

Description Usage Arguments

Description

Plot an estimated normalized clustering matrix for a specified number of clusters

Usage

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## S3 method for class 'bfcluster'
plot(object, k = NULL, prob_thres = NULL,
  perm = FALSE, ...)

Arguments

object

bfcluster object

k

the number of clusters. If not provided, it is set to be the first value of the number of clusters in the object

prob_thres

the probability at which to threshold the large entries of the clustering matrix for better visualization

perm

a logical indicating whether to permute the estimated normalized clustering matrix according to label estimates computed from it before plotting

...

further arguments passed to permute method


zhifeiyan/bfcluster documentation built on May 4, 2019, 11:21 p.m.