IGVgoto: Go to a specified region in IGV.
In zhujack/SRAdb: A compilation of metadata from NCBI SRA and tools
IGVgoto R Documentation
Go to a specified region in IGV.
Description
Using the remote command port of IGV, go to a specified region.
Usage
IGVgoto(sock, region)
Arguments
sock
A socket connection to IGV.
region
Scrolls to a locus. Use any text that is valid in the IGV search box.
Author(s)
Sean Davis <sdavis2@mail.nih.gov>
References
http://www.broadinstitute.org/igv/PortCommands
See Also
startIGV, IGVload
Examples
## Not run:
sock <- IGVsocket()
IGVgoto(sock, 'chr1:1-10000')
IGVgoto(sock, 'TP53')
## End(Not run)
zhujack/SRAdb documentation built on Oct. 26, 2022, 7:32 a.m.
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| IGVgoto | R Documentation |
Go to a specified region in IGV.
Description
Using the remote command port of IGV, go to a specified region.
Usage
IGVgoto(sock, region)
Arguments
sock |
A socket connection to IGV. |
region |
Scrolls to a locus. Use any text that is valid in the IGV search box. |
Author(s)
Sean Davis <sdavis2@mail.nih.gov>
References
http://www.broadinstitute.org/igv/PortCommands
See Also
startIGV, IGVload
Examples
## Not run: sock <- IGVsocket() IGVgoto(sock, 'chr1:1-10000') IGVgoto(sock, 'TP53') ## End(Not run)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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