plot_rec68: plot for hyperbolic tangent models models

Description Usage Arguments Details Examples

Description

plots of different parameter values in one plot, to determin the range of start values, plot_rec64 for LI-6400 data, and plot_rec68 for LI-6800 data.

Usage

1
2
plot_rec68(df, Am = max(df$A) - min(df$A), Rd = min(df$A),
  alpha = 0.01)

Arguments

Am

is the gross photosynthetic rate

Rd

dark respiration rate

alpha

is quantum yield at low light intensity

x

is the PAR intensity of the leaf

Details

use ggplot2 geom_smooth to fit the calculate data, generally the fit method is loess, but it does not matter, as we just want to see these data overlap with the measured ones as much as possible.

Examples

1
2
3
4
5
## Not run: 
plot_rec64(lrc64, Am = 23)
plot_rec68(lrc68, Am = 15, alpha = 0.01)

## End(Not run)

zhujiedong/lrc_start documentation built on May 31, 2019, 5:24 p.m.