plot.TopK: Plot triangle figure for a TopK object

In ziqiangc/TopK: TopK Exact Test

Description

A triangle plot illustrate the results of TopK test. This is a plot only for the scenario of K=2. The x-axis denotes the -log10 p_(1) -value and the y-axis denotes -log10 p_(2) -value. The p-values were tabulated across all permutations and displayed as counts (for WRS test); as scattered and smoothed points (for permutation t-test). The red circle denotes the value combination that was observed in the actual data.

Usage

## S3 method for class 'TopK'
plot(x, WobsDX = 1, ...)

Arguments

x	TopK object, typically result of TopK.test
WobsDX	the index of observed data in all permutations. Default value is 1
...	other parameters to be passed through to plotting functions.

ziqiangc/TopK documentation built on May 4, 2019, 11:23 p.m.