README.md

In ziqiaow/IMIX: Gaussian Mixture Model for Multi-Omics Data Integration

IMIX

R package for integrative genomics analysis using a multivariate mixture model framework. This package is also available in R/Cran: https://cran.rstudio.com/web/packages/IMIX/index.html.

Reference

• Ziqiao Wang and Peng Wei. IMIX: A multivariate mixture model approach to integrative analysis of multiple types of omics data. Bioinformatics. 2021 Apr 1;36(22-23):5439-5447. doi: 10.1093/bioinformatics/btaa1001. PMID: 33258948; PMCID: PMC8016490.

Installation

Install the IMIX package via github

if(!requireNamespace("devtools", quietly = TRUE))
    install.packages("devtools")
devtools::install_github("ziqiaow/IMIX",build_vignettes=TRUE) 

To get started with the package

Load the package and open the package vignette:

library("IMIX")
vignette("IMIX")

There will be examples for all the functions in IMIX package in vignette. If you have any question, use help().

Have fun with IMIX :smiley:

ziqiaow/IMIX documentation built on Nov. 19, 2022, 11:18 a.m.