ziyili20/CAMLU: Cell Annotation with the presence of unknown cells

Provide an autoencoder based method for annotation cell types from scRNA-seq data. The function can identify unknown cells with the input training data. CAMLU also can annotate the full lists of cell types with consideration of unknown cell type.

Getting started

Package details

AuthorZiyi Li and Yizhuo Wang
Bioconductor views cell annotation gene expression scRNAseq single cell unknown cells
MaintainerZiyi Li <zli16@mdanderson.org>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
ziyili20/CAMLU documentation built on Jan. 4, 2023, 9:58 a.m.