zji90/GSCA: GSCA: Gene Set Context Analysis

GSCA takes as input several lists of activated and repressed genes. GSCA then searches through a compendium of publicly available gene expression profiles for biological contexts that are enriched with a specified pattern of gene expression. GSCA provides both traditional R functions and interactive, user-friendly user interface.

Getting started

Package details

AuthorZhicheng Ji, Hongkai Ji
Bioconductor views GUI GeneExpression Visualization
MaintainerZhicheng Ji <zji4@jhu.edu>
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
zji90/GSCA documentation built on May 4, 2019, 11:23 p.m.