Files in zji90/SCATE
SCATE: Single-cell ATAC-seq Signal Extraction and Enhancement
.DS_Store
.gitattributes
DESCRIPTION
LICENSE
NAMESPACE
R/SCATE.R
R/SCATEpipeline.R
R/cellcluster.R
R/extractfeature.R
R/makedatabase.R
R/peakcall.R
R/satacprocess.R
README.html
README.md
build/vignette.rds
inst/doc/SCATE.R
inst/doc/SCATE.Rnw
inst/doc/SCATE.pdf
inst/extdata/example/.Rhistory
inst/extdata/example/GSM1596831.bam
inst/extdata/example/GSM1596840.bam
inst/extdata/example/GSM1596874.bam
inst/extdata/example/GSM1596881.bam
inst/extdata/example/GSM1596940.bam
inst/extdata/example/GSM1596942.bam
inst/extdata/example/GSM1596944.bam
inst/extdata/example/GSM1596961.bam
inst/extdata/example/GSM1597041.bam
inst/extdata/example/GSM1597096.bam
inst/extdata/example/SRR1779746.bam
inst/extdata/example/SRR1779805.bam
inst/extdata/example/SRR1779856.bam
inst/extdata/example/SRR1779874.bam
inst/extdata/example/SRR1779956.bam
inst/extdata/example/SRR1779959.bam
inst/extdata/example/SRR1779973.bam
inst/extdata/example/SRR1780018.bam
inst/extdata/example/SRR1780020.bam
inst/extdata/example/SRR1780054.bam
inst/extdata/hg19.rds
inst/extdata/mm10.rds
man/SCATE.Rd
man/SCATEpipeline.Rd
man/cellcluster.Rd
man/extractfeature.Rd
man/makedatabase.Rd
man/peakcall.Rd
man/satacprocess.Rd
vignettes/SCATE.Rnw
