plot_mirror: plot_mirror

In zym530902730/rplot: Visualization of modified and unmodified peptide spectra pairs for determination of modification positions in R

Description

plot_mirror function in this package

Usage

plot_mirror(fileName, f.msms, xmlurl, min_intensity = 100, cex = 1,
  srt = 0, ppm = 20, PPM_denominator = 1e+06, pdf_width = 20,
  pdf_height = 10, y_ion_col = "red", b_ion_col = "blue")

Arguments

fileName	filename
f.msms	f.msms
xmlurl	modifications.xml path
min_intensity	min_intensity=100
cex	cex
srt	srt
ppm	ppm
PPM_denominator	PPM_denominator
pdf_width	pdf_width
pdf_height	pdf_height
y_ion_col	y ion's color
b_ion_col	b ion's color

Author(s)

Yiming Zhao

zym530902730/rplot documentation built on May 26, 2019, 5:40 p.m.