mincostflow: Min-Cost-Max-Flow for cellular trajectories

In HetSeq: Identifying Modulators of Cellular Responses Leveraging Intercellular Heterogeneity

Min-Cost-Max-Flow for cellular trajectories

Description

Applies Min-Cost-Max-Flow to calculate optimal trajectories from distance matrices.

Usage

mincostflow(D.list, verbose = TRUE)

Arguments

D.list	List of (pruned) distance matrices. Can be generated by the distmat function.
verbose	Show verbose output.

Value

Matrix of cell-cell trajectories spanning all given timepoints.

Examples

## Not run: 

# Full vignette available on https://grandr.erhard-lab.de/articles/web/hetseq.html

  mincostflow(D.list)

## End(Not run)

HetSeq documentation built on June 1, 2026, 5:08 p.m.