mincostflow: Min-Cost-Max-Flow for cellular trajectories
In HetSeq: Identifying Modulators of Cellular Responses Leveraging Intercellular Heterogeneity
mincostflow R Documentation
Min-Cost-Max-Flow for cellular trajectories
Description
Applies Min-Cost-Max-Flow to calculate optimal trajectories from distance matrices.
Usage
mincostflow(D.list, verbose = TRUE)
Arguments
D.list
List of (pruned) distance matrices. Can be generated by the distmat function.
verbose
Show verbose output.
Value
Matrix of cell-cell trajectories spanning all given timepoints.
Examples
# Full vignette available on https://grandr.erhard-lab.de/articles/web/hetseq.html
mincostflow(D.list)
HetSeq documentation built on April 4, 2025, 2:03 a.m.
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| mincostflow | R Documentation |
Min-Cost-Max-Flow for cellular trajectories
Description
Applies Min-Cost-Max-Flow to calculate optimal trajectories from distance matrices.
Usage
mincostflow(D.list, verbose = TRUE)
Arguments
D.list |
List of (pruned) distance matrices. Can be generated by the distmat function. |
verbose |
Show verbose output. |
Value
Matrix of cell-cell trajectories spanning all given timepoints.
Examples
# Full vignette available on https://grandr.erhard-lab.de/articles/web/hetseq.html
mincostflow(D.list)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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