sbtab_to_vfgen: SBtab content exporter

In a-kramer/SBtabVFGEN: Converts from SBtab to vf,mod,[sbml]

SBtab content exporter

Description

This function interprets the SBtab content and exports it to three possible formats: (1) vfgen's ‘vf' format (xml); (2) NEURON’s mod file; (3) SBML if the libSBML package can be loaded.

Usage

sbtab_to_vfgen(SBtab, cla = TRUE)

Arguments

SBtab	a list as returned from any of the import functions [sbtab_from_tsv()] or [sbtab_from_ods()]
cla	a logical value that determines whether conservation law analysis should be performed. If this is TRUE (default) the resulting ODE model will be reduced to a state variable sub-set that is independent (in the sense of linear algebraic relationships).

Value

if conservation law analysis is turned on, this function returns the results, otherwise NA; if the model cannot be reduced, this also returns NULL.

a-kramer/SBtabVFGEN documentation built on Dec. 15, 2024, 1:52 a.m.