join_transcripts: (DEPRECATED) Extract and join information for transcripts.

In stemangiola/tidySCE: Brings SingleCellExperiment to the Tidyverse

(DEPRECATED) Extract and join information for transcripts.

Description

join_transcripts() extracts and joins information for specified transcripts

Usage

join_transcripts(
  .data,
  transcripts = NULL,
  all = FALSE,
  exclude_zeros = FALSE,
  shape = "long",
  ...
)

Arguments

.data	A tidySingleCellExperiment object
transcripts	A vector of transcript identifiers to join
all	If TRUE return all
exclude_zeros	If TRUE exclude zero values
shape	Format of the returned table "long" or "wide"
...	Parameters to pass to join wide, i.e. assay name to extract transcript abundance from

Details

DEPRECATED, please use join_features()

Value

A 'tbl' containing the information.for the specified transcripts

Examples

print("DEPRECATED")

stemangiola/tidySCE documentation built on Feb. 9, 2024, 10:12 a.m.