BADGER: A package for identifying sample mixups in combined expression and genotyping studies.

BADGER takes a set of expression array data and one of genotype array data and, given information on how sample mappings were intended to be, determines the apparent relationships between genotype and expression before predicting genotypes for each expression array. From these predictions, mismatches can be identified.

Package details

AuthorLynch AG, Dunning MJ
MaintainerAG Lynch <[email protected]>
Package repositoryView on R-Forge
Installation Install the latest version of this package by entering the following in R:
install.packages("BADGER", repos="")

Try the BADGER package in your browser

Any scripts or data that you put into this service are public.

BADGER documentation built on May 31, 2017, 2:39 a.m.